Synthetic Morphology Using Alternative Inputs

نویسندگان

  • Hiromasa Tanaka
  • Tau-Mu Yi
چکیده

Designing the shape and size of a cell is an interesting challenge for synthetic biology. Prolonged exposure to the mating pheromone alpha-factor induces an unusual morphology in yeast cells: multiple mating projections. The goal of this work was to reproduce the multiple projections phenotype in the absence of alpha-factor using a gain-of-function approach termed "Alternative Inputs (AIs)". An alternative input is defined as any genetic manipulation that can activate the signaling pathway instead of the natural input. Interestingly, none of the alternative inputs were sufficient to produce multiple projections although some produced a single projection. Then, we extended our search by creating all combinations of alternative inputs and deletions that were summarized in an AIs-Deletions matrix. We found a genetic manipulation (AI-Ste5p ste2Delta) that enhanced the formation of multiple projections. Following up this lead, we demonstrated that AI-Ste4p and AI-Ste5p were sufficient to produce multiple projections when combined. Further, we showed that overexpression of a membrane-targeted form of Ste5p alone could also induce multiple projections. Thus, we successfully re-engineered the multiple projections mating morphology using alternative inputs without alpha-factor.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Extending Integrate-and-Fire Model Neurons to Account for the Effects of Weak Electric Fields and Input Filtering Mediated by the Dendrite

Transcranial brain stimulation and evidence of ephaptic coupling have recently sparked strong interests in understanding the effects of weak electric fields on the dynamics of brain networks and of coupled populations of neurons. The collective dynamics of large neuronal populations can be efficiently studied using single-compartment (point) model neurons of the integrate-and-fire (IF) type as ...

متن کامل

Alternative Methods for Counting Overlapping Grains in Digital Images

Standard granulometry methods are used to count the number of disjoint grains in digital images. For the case of overlapping grains, the standard method is not effective. Two alternative methods for counting overlapping grains in digital images are proposed. The methods are based on mathematical morphology and are suitable for grains of circular shape. The standard and overlapping methods were ...

متن کامل

New Shewhart-type synthetic bar{X} control schemes for non-normal data

In this paper, Burr-type XII ̄X synthetic schemes are proposed as an alternative to the classical ̄X synthetic schemes when the assumption of normality fails to hold. First, the basic design of the Burr-type XII ̄X synthetic scheme is developed and its performance investigated using exact formulae. Secondly, the non-side-sensitive and side-sensitive Burr-type XII ̄X synthetic schemes are int...

متن کامل

Morphology and the Hierarchical Lexicon

Approaches to morphology typically account for regular, completely productive aaxation, while ignoring sub-regular and semi-productive schemata. I present an alternative approach to derivational morphology which relates exceptions and sub-regularities to the productive rules, and also captures some linguistically relevant generalizations that cannot be expressed in other theories. The data come...

متن کامل

Multifunctional agriculture: Root and nitrogen dynamics in two alternative systems

The Corn Belt of the Midwestern United States is among the most productive grainproducing regions of the world. Yet the development of the Corn Belt has been accompanied by a suite of environmental concerns. Alternative systems have been proposed that remediate environmental quality while relying on fewer external inputs (e.g., synthetic nitrogen fertilizer) than dominate cropping systems of co...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره 4  شماره 

صفحات  -

تاریخ انتشار 2009